Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AC68Uncharacterized protein. (1573 aa)    
Predicted Functional Partners:
A0A178B0K9
Vps52-domain-containing protein.
    
 0.991
A0A178AQX7
Vps54-domain-containing protein.
    
 0.988
A0A178BBH5
Vps53_N domain-containing protein.
    
 0.988
A0A178AC92
Glycerol:H+ symporter-like protein; Belongs to the membrane-bound acyltransferase family.
    
 0.935
A0A178BD37
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
 0.919
A0A178AUL6
PHD-type domain-containing protein.
     
 0.774
A0A178A9K5
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.769
A0A178B465
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.769
A0A178AQ88
Uncharacterized protein.
     
 0.748
A0A178BD42
Fungal_trans domain-containing protein.
     
 0.748
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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