Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178ACE5Clavaminate synthase-like protein. (402 aa)    
Predicted Functional Partners:
A0A178BBI8
Clavaminate synthase-like protein.
     
 0.749
A0A178B3V9
Uncharacterized protein.
   
 
 0.720
A0A178BBU9
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.720
A0A178B4Z2
GTP cyclohydrolase I.
     
  0.703
A0A178B4K9
Thioesterase/thiol ester dehydrase-isomerase.
     
  0.680
A0A178B0J2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.637
A0A178B7I9
ALDH-like protein.
   
  0.637
A0A178B9H8
LigB subunit of an aromatic-ring-opening dioxygenase LigAB.
   
  0.637
A0A178ABX5
Dihydroxy-acid and 6-phosphogluconate dehydratase.
    
 0.632
A0A178AJJ5
Dihydroxy-acid dehydratase.
    
 0.632
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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