Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ACF8Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (560 aa)    
Predicted Functional Partners:
A0A178A935
Beta-hexosaminidase.
  
  
  0.895
A0A178ABZ6
Beta-hexosaminidase.
     
  0.874
A0A178AU78
Glycoside hydrolase.
     
 0.847
A0A178BCZ7
Chitinase 1; Belongs to the glycosyl hydrolase 18 family.
     
  0.847
A0A178BBA4
Glycoside hydrolase.
     
 0.842
A0A178AZS0
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.841
A0A178AVA3
Glycoside hydrolase; Belongs to the glycosyl hydrolase 18 family.
  
  
 
0.826
A0A178AZX2
Uncharacterized protein.
     
 0.824
A0A178AFR8
Chitin synthase; Plays a major role in cell wall biogenesis.
     
 0.820
A0A178AWY9
Chitin synthase; Plays a major role in cell wall biogenesis.
     
 0.820
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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