Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ACH9White collar-1 transcript variant 1. (1063 aa)    
Predicted Functional Partners:
A0A178AJZ5
White collar-2.
    
 0.964
A0A178AGI5
Uncharacterized protein.
    
 
 0.790
A0A178AV54
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
   
 0.778
A0A178BBF8
Velvet domain-containing protein.
    
 0.764
A0A178B2Q5
Uncharacterized protein.
    
 0.763
A0A178B6C8
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.665
A0A178B911
Family A G protein-coupled receptor-like protein.
      
 0.646
A0A178B0H5
Arginase/deacetylase.
   
 0.638
A0A178B390
Thioredoxin-domain-containing protein.
    
 0.626
A0A178AMZ2
Cryptochrome.
      
 0.621
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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