A0A178ACQ0 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178ACQ0

Cytochrome P450. (532 aa)

Predicted Functional Partners:

A0A178ALG7

0.675

A0A178B3V9

0.626

A0A178BBU9

0.626

MET3

0.625

A0A178AG47

0.588

A0A178AN68

0.588

A0A178AQS8

0.588

A0A178BD36

0.588

A0A178AZH5

0.504

A0A178AHC9

0.497

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A178ACQ0	A0A178AG47	A0A178ACQ0	A0A178AG47	Cytochrome P450.	Molybdopterin binding oxidoreductase.	0.588
A0A178ACQ0	A0A178AHC9	A0A178ACQ0	A0A178AHC9	Cytochrome P450.	Alpha/beta-hydrolase.	0.497
A0A178ACQ0	A0A178ALG7	A0A178ACQ0	A0A178ALG7	Cytochrome P450.	Tryptophan synthase.	0.675
A0A178ACQ0	A0A178AN68	A0A178ACQ0	A0A178AN68	Cytochrome P450.	Molybdopterin binding oxidoreductase.	0.588
A0A178ACQ0	A0A178AQS8	A0A178ACQ0	A0A178AQS8	Cytochrome P450.	Sulfite oxidase-like protein.	0.588
A0A178ACQ0	A0A178AZH5	A0A178ACQ0	A0A178AZH5	Cytochrome P450.	PhyH-domain-containing protein.	0.504
A0A178ACQ0	A0A178B3V9	A0A178ACQ0	A0A178B3V9	Cytochrome P450.	Uncharacterized protein.	0.626
A0A178ACQ0	A0A178BBU9	A0A178ACQ0	A0A178BBU9	Cytochrome P450.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.626
A0A178ACQ0	A0A178BD36	A0A178ACQ0	A0A178BD36	Cytochrome P450.	Molybdopterin binding oxidoreductase.	0.588
A0A178ACQ0	MET3	A0A178ACQ0	A0A178B6K6	Cytochrome P450.	Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family.	0.625
A0A178AG47	A0A178ACQ0	A0A178AG47	A0A178ACQ0	Molybdopterin binding oxidoreductase.	Cytochrome P450.	0.588
A0A178AG47	A0A178AN68	A0A178AG47	A0A178AN68	Molybdopterin binding oxidoreductase.	Molybdopterin binding oxidoreductase.	0.741
A0A178AG47	A0A178AQS8	A0A178AG47	A0A178AQS8	Molybdopterin binding oxidoreductase.	Sulfite oxidase-like protein.	0.757
A0A178AG47	A0A178B3V9	A0A178AG47	A0A178B3V9	Molybdopterin binding oxidoreductase.	Uncharacterized protein.	0.894
A0A178AG47	A0A178BBU9	A0A178AG47	A0A178BBU9	Molybdopterin binding oxidoreductase.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.894
A0A178AG47	A0A178BD36	A0A178AG47	A0A178BD36	Molybdopterin binding oxidoreductase.	Molybdopterin binding oxidoreductase.	0.741
A0A178AG47	MET3	A0A178AG47	A0A178B6K6	Molybdopterin binding oxidoreductase.	Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family.	0.937
A0A178AHC9	A0A178ACQ0	A0A178AHC9	A0A178ACQ0	Alpha/beta-hydrolase.	Cytochrome P450.	0.497
A0A178AHC9	A0A178ALG7	A0A178AHC9	A0A178ALG7	Alpha/beta-hydrolase.	Tryptophan synthase.	0.857
A0A178ALG7	A0A178ACQ0	A0A178ALG7	A0A178ACQ0	Tryptophan synthase.	Cytochrome P450.	0.675