STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ACS6Zn(2)-C6 fungal-type domain-containing protein. (505 aa)    
Predicted Functional Partners:
A0A178ALG7
Tryptophan synthase.
     
 0.711
A0A178AJ31
Uncharacterized protein.
    
  0.610
A0A178ADL3
Uncharacterized protein.
   
 0.607
A0A178B1T4
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.595
A0A178APX6
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.574
A0A178B002
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.499
A0A178AFM7
Peptidase S59 domain-containing protein.
    
  0.438
A0A178ANW0
Uncharacterized protein.
    
  0.438
A0A178B2I7
Uncharacterized protein.
    
  0.438
A0A178B8S9
Uncharacterized protein.
    
  0.435
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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