Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ACT0Uncharacterized protein. (946 aa)    
Predicted Functional Partners:
A0A178AFS5
SH3-domain-containing protein.
    
 
 0.912
A0A178AQQ6
Reduced viability upon starvation protein.
    
   0.893
A0A178BBA4
Glycoside hydrolase.
   
  
 0.810
A0A178B7C4
40S ribosomal protein-like protein S22; Belongs to the universal ribosomal protein uS8 family.
    
   0.791
A0A178A8V5
Uncharacterized protein.
   
  
 0.670
A0A178ALN5
Uncharacterized protein.
   
 
 0.670
A0A178ATR7
Uncharacterized protein.
   
 
 0.670
A0A178B7M4
Putative extracellular alpha-1,3-glucanase/mutanase.
   
 
 0.670
A0A178A9K0
Alpha-mann_mid domain-containing protein.
      
 0.646
A0A178AGG5
DUF500-domain-containing protein.
    
   0.622
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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