Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ACY7Uncharacterized protein. (461 aa)    
Predicted Functional Partners:
A0A178B464
Uncharacterized protein.
   
 0.906
A0A178AV04
Uncharacterized protein.
   
 0.898
A0A178AXZ1
Uncharacterized protein.
   
 0.889
A0A178AAM7
Uncharacterized protein.
    
 0.866
A0A178B443
Uncharacterized protein.
   
 0.848
A0A178B475
WD repeat-containing protein 26.
   
 0.848
A0A178AG09
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.767
A0A178AA77
Protein yippee-like; Belongs to the yippee family.
   
 
 0.560
A0A178ADF0
Uncharacterized protein.
   
 
 0.560
A0A178AP84
Yippee-domain-containing protein.
   
 
 0.560
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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