A0A178AD40 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178AD40

P-loop containing nucleoside triphosphate hydrolase protein. (417 aa)

Predicted Functional Partners:

A0A178B7Z5

0.887

A0A178AIP8

0.739

A0A178AZ03

0.714

A0A178B970

0.681

A0A178APL6

0.664

A0A178ALZ6

0.658

A0A178AL64

0.655

A0A178AYY5

0.634

A0A178ALG7

0.633

A0A178B6D9

0.609

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178AD40	A0A178AIP8	P-loop containing nucleoside triphosphate hydrolase protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.739
A0A178AD40	A0A178AL64	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.655
A0A178AD40	A0A178ALG7	P-loop containing nucleoside triphosphate hydrolase protein.	Tryptophan synthase.	0.633
A0A178AD40	A0A178ALZ6	P-loop containing nucleoside triphosphate hydrolase protein.	Ribosomal protein L24.	0.658
A0A178AD40	A0A178APL6	P-loop containing nucleoside triphosphate hydrolase protein.	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	0.664
A0A178AD40	A0A178AYY5	P-loop containing nucleoside triphosphate hydrolase protein.	Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.	0.634
A0A178AD40	A0A178AZ03	P-loop containing nucleoside triphosphate hydrolase protein.	Peptidyl-tRNA hydrolase.	0.714
A0A178AD40	A0A178B6D9	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.609
A0A178AD40	A0A178B7Z5	P-loop containing nucleoside triphosphate hydrolase protein.	EEF1-gamma domain-containing protein.	0.887
A0A178AD40	A0A178B970	P-loop containing nucleoside triphosphate hydrolase protein.	Release factor.	0.681
A0A178AIP8	A0A178AD40	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	P-loop containing nucleoside triphosphate hydrolase protein.	0.739
A0A178AIP8	A0A178AL64	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Uncharacterized protein.	0.877
A0A178AIP8	A0A178ALG7	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Tryptophan synthase.	0.752
A0A178AIP8	A0A178ALZ6	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Ribosomal protein L24.	0.544
A0A178AIP8	A0A178APL6	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	0.803
A0A178AIP8	A0A178AYY5	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.	0.845
A0A178AIP8	A0A178B6D9	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Uncharacterized protein.	0.522
A0A178AIP8	A0A178B970	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Release factor.	0.668
A0A178AL64	A0A178AD40	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.655
A0A178AL64	A0A178AIP8	Uncharacterized protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.877