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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD47GH131_N domain-containing protein. (286 aa)    
Predicted Functional Partners:
A0A178AJ31
Uncharacterized protein.
    
 0.817
A0A178B0G1
RanBD1 domain-containing protein.
    
 0.698
A0A178B3U3
Amidase signature enzyme.
    
 0.618
A0A178B1T4
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.598
A0A178AMG7
WD40 repeat-like protein.
    
 0.597
A0A178AGI6
SPRY domain-containing protein.
    
 0.596
A0A178ADL3
Uncharacterized protein.
    
 0.582
A0A178APX6
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.573
A0A178B002
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.557
A0A178AFU6
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  0.555
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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