STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD48DUF427-domain-containing protein. (98 aa)    
Predicted Functional Partners:
A0A178AQW3
Nucleoside diphosphate kinase.
     
  0.682
A0A178ACJ9
PP2C-domain-containing protein.
     
  0.590
A0A178B6E6
Molybdenum cofactor biosynthesis prote.
     
  0.584
A0A178B7W3
GTP cyclohydrolase subunit MoaC.
     
  0.584
A0A178BF97
Lactamase_B domain-containing protein.
  
 
  0.474
A0A178B3C9
Ferredoxin.
    
  0.447
A0A178AFC9
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
     
  0.428
A0A178ALH2
F-box domain-containing protein.
     
  0.428
A0A178ASM2
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
     
  0.428
A0A178AXQ3
Uncharacterized protein.
     
  0.428
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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