STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD49Histidyl-tRNA synthetase. (446 aa)    
Predicted Functional Partners:
A0A178B081
S1 motif domain-containing protein.
   
 0.888
A0A178AL64
Uncharacterized protein.
  
 
 0.879
A0A178B057
ARM repeat-containing protein.
  
 
 0.878
A0A178AK01
Histidine biosynthesis trifunctional protein.
    
 0.854
A0A178B0K1
Kinase-like protein.
     
 0.840
A0A178AP10
Lysyl-tRNA synthetase.
  
 
 0.839
A0A178ABA1
Leucyl-tRNA synthetase.
  
 
 0.836
A0A178B5S2
Nucleic acid-binding protein.
  
 
 0.836
A0A178BCR8
HisG-domain-containing protein.
  
 0.834
A0A178AAS9
Glycyl-tRNA synthetase.
  
 
 0.823
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.