STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD60SET domain-containing protein. (481 aa)    
Predicted Functional Partners:
A0A178AY59
MINDY_DUB domain-containing protein.
    
 0.771
A0A178BAZ7
Glycoside hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.771
A0A178AC80
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase.
     
 0.716
A0A178AG52
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
     
 0.716
A0A178APN4
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.685
A0A178AGD4
Putative riboflavin biosynthesis protein Rib7.
    
  0.678
A0A178AQV1
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
  0.678
A0A178ATV8
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
 0.675
A0A178B823
Uncharacterized protein.
   
 0.675
A0A178AM47
ATP-citrate synthase (ATP-citrate (Pro-S-)-lyase).
   
  0.669
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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