STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD61Uncharacterized protein. (376 aa)    
Predicted Functional Partners:
A0A178AH91
RNA-binding domain-containing protein.
    
 0.954
A0A178AFW3
Uncharacterized protein.
    
 0.942
A0A178AQ54
RRM domain-containing protein.
    
 
 0.942
A0A178ATY4
Uncharacterized protein.
   
 0.939
A0A178B2Q4
DEP domain-containing protein.
    
   0.905
A0A178AI83
Uncharacterized protein.
    
 
 0.901
A0A178AFE0
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.899
A0A178B658
Small nuclear ribonucleoprotein Sm D3.
    
 0.899
A0A178APM9
Uncharacterized protein.
    
 
 0.897
A0A178AHQ2
Uncharacterized protein.
   
 0.891
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.