STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD63DUF2263 domain-containing protein. (295 aa)    
Predicted Functional Partners:
A0A178B1T6
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.703
A0A178AB55
50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.603
A0A178B582
Nucleic acid-binding protein.
  
   0.586
A0A178BBL6
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.583
A0A178AC59
Prohibitin.
   
 0.549
A0A178AM57
PHB domain-containing protein.
   
 0.549
A0A178AWV6
Stomatin family protein-like protein.
   
 0.549
A0A178B8B5
Prohibitin.
   
 0.549
A0A178APZ6
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.544
A0A178AHR1
Peptidase_M48 domain-containing protein.
   
 0.540
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.