STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD71Uncharacterized protein. (395 aa)    
Predicted Functional Partners:
A0A178AP30
Ubiquitin.
   
 0.685
A0A178AG67
Polyubiquitin.
    
 0.655
A0A178AWJ7
Ubiquitin-domain-containing protein.
    
 0.655
A0A178ACJ9
PP2C-domain-containing protein.
    
 0.579
A0A178A963
Mov34-domain-containing protein.
   
 0.521
A0A178ABP3
Uncharacterized protein.
    
  0.514
A0A178AZ29
RRN7-type domain-containing protein.
    
  0.514
A0A178AR43
Mov34-domain-containing protein.
   
 0.509
A0A178AVH4
Uncharacterized protein.
   
 0.509
A0A178AAU4
Ubiquitin-domain-containing protein.
    
  0.497
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.