STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD80Uncharacterized protein. (268 aa)    
Predicted Functional Partners:
A0A178B0K9
Vps52-domain-containing protein.
   
 0.999
A0A178BBH5
Vps53_N domain-containing protein.
   
 0.999
A0A178AQX7
Vps54-domain-containing protein.
    
 0.998
A0A178B465
t-SNARE coiled-coil homology domain-containing protein.
    
 0.925
A0A178AI92
t-SNARE affecting a late Golgi compartment protein 2; Belongs to the syntaxin family.
    
 0.861
A0A178BC58
Thioredoxin reductase.
     
  0.849
A0A178A9K5
t-SNARE coiled-coil homology domain-containing protein.
    
 0.841
A0A178A7V9
V-snare-domain-containing protein.
    
 0.825
A0A178AX52
COG4-domain-containing protein.
   
 
 0.778
A0A178AYC4
Dor1-domain-containing protein.
   
 0.773
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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