STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD83Chromatin associated protein KTI12. (296 aa)    
Predicted Functional Partners:
A0A178AFG6
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 0.980
A0A178AAQ3
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 0.976
A0A178AU87
RNA polymeras-like protein II Elongator subunit.
    
 0.969
A0A178B1T8
Paxneb superfamily protein-like protein.
   
 0.914
A0A178AWD3
Uncharacterized protein.
   
 
 0.881
A0A178B0V2
DPBB_1 domain-containing protein.
   
 
 0.881
A0A178ALG9
Zf-CSL-domain-containing protein.
    
 
 0.827
A0A178AM04
Uncharacterized protein.
    
 
 0.827
A0A178B2A3
Uncharacterized protein.
   
 
 0.789
A0A178B8U4
Uncharacterized protein.
    
 0.774
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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