STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD84Uncharacterized protein. (681 aa)    
Predicted Functional Partners:
A0A178AGN3
Proteasome subunit alpha type.
    
 
 0.867
A0A178AV60
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.853
A0A178BCM0
VWFA domain-containing protein.
    
 
 0.848
A0A178ANY2
Uncharacterized protein.
    
 
 0.832
A0A178BA75
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 
 0.822
A0A178AMG7
WD40 repeat-like protein.
    
 
 0.814
A0A178AEH1
E3 ubiquitin protein ligase.
    
   0.810
A0A178ALF0
Helicase swr1.
    
   0.809
A0A178BE41
26S proteasome subunit P45; Belongs to the AAA ATPase family.
    
 
 0.786
A0A178AEG5
Uncharacterized protein.
   
 0.776
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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