STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AD85Uncharacterized protein; Belongs to the OSBP family. (456 aa)    
Predicted Functional Partners:
A0A178AG62
Multidrug efflux transporter AcrB transmembrane domain-containing protein.
   
 0.640
A0A178AEE1
VAMP-associated protein.
   
 
 0.605
A0A178B6M2
Uncharacterized protein; Belongs to the OSBP family.
   
 0.585
A0A178AFV5
PH domain-containing protein.
   
 0.556
IQ06DRAFT_695
ARF GTPase-like protein activator.
      
 0.532
A0A178AJ19
Phosphatidylinositol 4-kinase-like protein PIK1; Belongs to the PI3/PI4-kinase family.
   
 
 0.504
A0A178AJZ0
NCA2-domain-containing protein.
    
 0.495
A0A178B7N1
NIPSNAP-domain-containing protein.
   
  0.483
A0A178AML2
SSD domain-containing protein.
   
  0.478
A0A178AZG8
PRTase-like protein.
    
  0.459
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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