Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADD0Mitochondrial carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. (406 aa)    
Predicted Functional Partners:
A0A178AK67
Ribosomal_L14e domain-containing protein.
   
 
 0.724
A0A178BCJ7
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.720
A0A178AYD9
60S ribosomal protein-like protein L28.
   
   0.686
A0A178ATT4
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.684
A0A178ATS4
KOW domain-containing protein.
   
 
 0.681
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.668
A0A178ANE0
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.662
A0A178B015
Ribosomal protein-like protein S15.
   
  0.659
A0A178ACZ6
Ribosomal protein S2.
   
  0.658
A0A178AHP1
Ribosomal protein S7.
   
 0.658
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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