STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADE3Aa_trans domain-containing protein. (550 aa)    
Predicted Functional Partners:
A0A178A8K3
Uncharacterized protein.
    
 0.787
A0A178AG42
Uncharacterized protein.
    
 0.787
A0A178AGH8
Uncharacterized protein.
    
 0.787
A0A178B5Z8
Uncharacterized protein.
    
 0.785
A0A178AC47
UDENN FLCN/SMCR8-type domain-containing protein.
     
 0.657
A0A178AEN3
Uncharacterized protein.
    
 0.652
A0A178AQW8
Uncharacterized protein.
    
 0.652
A0A178B976
Uncharacterized protein.
    
 0.652
A0A178B2Z7
Uncharacterized protein.
     
 0.634
A0A178AXJ4
V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.630
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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