STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADF2HAD-like protein. (290 aa)    
Predicted Functional Partners:
A0A178AEX1
60S ribosomal protein L5-B.
 
      0.767
A0A178BAV4
Uncharacterized protein.
  
 0.702
MRI1
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
  
 
  0.574
A0A178AUT8
Acyl-CoA dehydrogenase NM domain-like protein.
  
 0.570
A0A178B9C3
NAD(P)-binding protein.
  
 0.568
A0A178ADT3
ClpP/crotonase.
   
 0.545
A0A178B2I1
ClpP/crotonase.
   
 0.545
A0A178AFQ7
AlcB domain-containing protein.
    
  0.538
A0A178B7Z9
AlcB domain-containing protein.
    
  0.538
A0A178AEI3
Mitochondrial acetolactate synthase-like protein small subunit.
     
  0.534
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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