A0A178ADF9 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178ADF9

Ankyrin. (319 aa)

Predicted Functional Partners:

cnxH

0.716

A0A178A9Z7

0.703

A0A178AI71

0.498

A0A178B2M8

0.474

A0A178B8B3

0.453

A0A178AZ53

0.449

A0A178A9L6

0.448

A0A178A963

0.442

A0A178APH4

0.441

A0A178AVR0

0.438

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A178A963	A0A178A9L6	A0A178A963	A0A178A9L6	Mov34-domain-containing protein.	Uncharacterized protein.	0.534
A0A178A963	A0A178A9Z7	A0A178A963	A0A178A9Z7	Mov34-domain-containing protein.	GDPD-domain-containing protein.	0.746
A0A178A963	A0A178ADF9	A0A178A963	A0A178ADF9	Mov34-domain-containing protein.	Ankyrin.	0.442
A0A178A963	A0A178APH4	A0A178A963	A0A178APH4	Mov34-domain-containing protein.	POZ domain-containing protein; Belongs to the SKP1 family.	0.802
A0A178A963	A0A178AVR0	A0A178A963	A0A178AVR0	Mov34-domain-containing protein.	PCI-domain-containing protein.	0.999
A0A178A963	A0A178B2M8	A0A178A963	A0A178B2M8	Mov34-domain-containing protein.	RhoGAP-domain-containing protein.	0.599
A0A178A963	A0A178B8B3	A0A178A963	A0A178B8B3	Mov34-domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.540
A0A178A963	cnxH	A0A178A963	A0A178B9Y5	Mov34-domain-containing protein.	Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.	0.526
A0A178A9L6	A0A178A963	A0A178A9L6	A0A178A963	Uncharacterized protein.	Mov34-domain-containing protein.	0.534
A0A178A9L6	A0A178A9Z7	A0A178A9L6	A0A178A9Z7	Uncharacterized protein.	GDPD-domain-containing protein.	0.454
A0A178A9L6	A0A178ADF9	A0A178A9L6	A0A178ADF9	Uncharacterized protein.	Ankyrin.	0.448
A0A178A9L6	A0A178AI71	A0A178A9L6	A0A178AI71	Uncharacterized protein.	Kinase-like protein.	0.640
A0A178A9L6	A0A178AVR0	A0A178A9L6	A0A178AVR0	Uncharacterized protein.	PCI-domain-containing protein.	0.508
A0A178A9L6	A0A178B2M8	A0A178A9L6	A0A178B2M8	Uncharacterized protein.	RhoGAP-domain-containing protein.	0.807
A0A178A9L6	A0A178B8B3	A0A178A9L6	A0A178B8B3	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.969
A0A178A9Z7	A0A178A963	A0A178A9Z7	A0A178A963	GDPD-domain-containing protein.	Mov34-domain-containing protein.	0.746
A0A178A9Z7	A0A178A9L6	A0A178A9Z7	A0A178A9L6	GDPD-domain-containing protein.	Uncharacterized protein.	0.454
A0A178A9Z7	A0A178ADF9	A0A178A9Z7	A0A178ADF9	GDPD-domain-containing protein.	Ankyrin.	0.703
A0A178A9Z7	A0A178AI71	A0A178A9Z7	A0A178AI71	GDPD-domain-containing protein.	Kinase-like protein.	0.946
A0A178A9Z7	A0A178APH4	A0A178A9Z7	A0A178APH4	GDPD-domain-containing protein.	POZ domain-containing protein; Belongs to the SKP1 family.	0.496