Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADI4Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
A0A178B1M7
NAD(P)-binding protein.
  
  0.692
A0A178BA85
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  0.692
A0A178B9C3
NAD(P)-binding protein.
  
  0.480
A0A178A8W2
Salicylaldehyde dehydrogenase.
    
  0.432
A0A178AGE3
Aldehyde dehydrogenase.
    
  0.432
A0A178AY90
Aldehyde dehydrogenase.
    
  0.432
A0A178B2R1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.432
A0A178B7M5
Succinate-semialdehyde dehydrogenase.
    
  0.432
A0A178B9C2
Succinate-semialdehyde dehydrogenase.
    
  0.432
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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