STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADK3Clavaminate synthase-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (342 aa)    
Predicted Functional Partners:
A0A178AGQ6
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.625
A0A178A8Q5
Uncharacterized protein.
    
 0.614
A0A178AK61
G/U mismatch-specific DNA glycosylase.
      
 0.537
A0A178AE36
ADP-ribosylation factor family protein; Belongs to the small GTPase superfamily. Arf family.
    
  0.488
A0A178ATY7
Clavaminate synthase-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
   
0.448
A0A178B3U3
Amidase signature enzyme.
    
  0.414
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.