Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADL8Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
A0A178APH4
POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.837
A0A178AZC1
RING/U-box.
    
 0.828
A0A178AP30
Ubiquitin.
    
 0.775
A0A178B631
TIP120-domain-containing protein.
    
 0.753
A0A178BF14
E2_bind domain-containing protein.
   
 0.628
A0A178A8P9
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 0.622
A0A178AR43
Mov34-domain-containing protein.
    
 0.621
A0A178AVH4
Uncharacterized protein.
    
 0.621
A0A178AF21
Protein-L-isoaspartate O-methyltransferase.
    
  0.616
A0A178B830
PCI-domain-containing protein.
   
  0.548
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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