STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADM0Heme oxygenase-like protein. (390 aa)    
Predicted Functional Partners:
A0A178AHE4
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.910
A0A178ALZ5
Frataxin.
     
 0.819
A0A178AZL1
HAD-like protein.
     
 0.803
A0A178B892
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
     
 0.757
A0A178AQ09
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
  0.720
A0A178ARM4
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
  0.720
A0A178AKG6
Uncharacterized protein.
     
 0.700
A0A178AHF4
Cwf15/Cwc15 cell cycle control protein.
     
  0.686
A0A178APL1
PEP_hydrolase domain-containing protein.
     
  0.685
A0A178ACZ3
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 
 0.676
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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