STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADN0Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
A0A178AUK6
Uncharacterized protein.
   
 0.668
A0A178B9G5
Peptidase C50 domain-containing protein.
   
 
  0.599
A0A178AB38
Calponin-homology (CH) domain-containing protein.
   
  
 0.540
A0A178AV46
Uncharacterized protein.
   
 
 0.537
A0A178AXA1
Uncharacterized protein.
   
 
 0.537
A0A178A916
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
  0.524
A0A178B8C9
Kinesin-domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.515
A0A178B253
DHR10 domain-containing protein.
   
 
 0.503
A0A178AUP3
NUDE_C domain-containing protein.
    
 0.498
A0A178BA03
Uncharacterized protein.
   
    0.482
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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