STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADR2Cytochrome P450; Belongs to the cytochrome P450 family. (531 aa)    
Predicted Functional Partners:
A0A178B3V9
Uncharacterized protein.
    
 0.638
A0A178BBU9
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.638
A0A178ABU7
C-5 sterol desaturas-like protein; Belongs to the sterol desaturase family.
   
 0.545
A0A178B2B6
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.524
A0A178AWD7
ERG4/ERG24 ergosterol biosynthesis protein.
   
 0.512
A0A178AHC9
Alpha/beta-hydrolase.
   
  0.489
A0A178AHR2
Alpha/beta-hydrolase.
   
  0.489
A0A178AMD9
Alpha/beta-hydrolase.
   
  0.489
A0A178AZ34
Alpha/beta-hydrolase.
   
  0.489
A0A178ABF3
C-24(28) sterol reductase.
    
 0.467
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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