Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADS5Uncharacterized protein. (525 aa)    
Predicted Functional Partners:
A0A178ASV6
Uncharacterized protein.
   
 0.993
A0A178ANL6
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.990
A0A178B1Y0
U2 small nuclear ribonucleo protein A.
   
 0.989
A0A178BB11
Splicing factor 3B subunit 1.
   
 0.983
A0A178ALS8
Matrin-type domain-containing protein.
    
 0.980
A0A178AQU8
Matrin-type domain-containing protein.
   
 0.978
A0A178B8Y3
Uncharacterized protein.
   
 0.974
A0A178AXY5
DUF382-domain-containing protein.
   
  0.965
A0A178AZZ4
RNA-binding domain-containing protein.
    
 0.956
A0A178AFQ3
Tudor domain-containing protein.
   
  0.915
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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