Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADU0Alpha/beta-hydrolase. (243 aa)    
Predicted Functional Partners:
A0A178B5V0
Alpha/beta-hydrolase.
     
 0.661
A0A178ADW6
Uncharacterized protein.
    
   0.501
A0A178AY83
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
   0.501
A0A178B2Y7
Uncharacterized protein.
    
   0.501
A0A178AT57
Uncharacterized protein.
    
   0.497
A0A178BC37
DAGAT-domain-containing protein.
   
 
  0.458
A0A178AGI7
Putative Fe-containing alcohol dehydrogenase.
  
 
  0.446
A0A178ADN2
Sedlin.
    
   0.438
A0A178AUL3
Dehydroquinate synthase-like protein.
  
 
  0.428
A0A178AZI9
Dehydroquinate synthase-like protein.
  
 
  0.428
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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