A0A178ADV4 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178ADV4

DnaJ-domain-containing protein. (297 aa)

Predicted Functional Partners:

A0A178AZB4

0.970

A0A178AL75

0.881

A0A178A7Q7

0.793

A0A178AJP9

0.793

A0A178ALS3

0.760

A0A178AZE1

0.749

A0A178BDY2

0.724

A0A178ASL4

0.723

A0A178B3D4

0.723

A0A178B758

0.723

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178A7Q7	A0A178ADV4	Uncharacterized protein; Belongs to the heat shock protein 70 family.	DnaJ-domain-containing protein.	0.793
A0A178A7Q7	A0A178AL75	Uncharacterized protein; Belongs to the heat shock protein 70 family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.783
A0A178A7Q7	A0A178ALS3	Uncharacterized protein; Belongs to the heat shock protein 70 family.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the ClpA/ClpB family.	0.756
A0A178A7Q7	A0A178ASL4	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Flavin_Reduct domain-containing protein.	0.860
A0A178A7Q7	A0A178AZB4	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	0.963
A0A178A7Q7	A0A178AZE1	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Chaperonin GroL; Belongs to the chaperonin (HSP60) family.	0.958
A0A178A7Q7	A0A178B3D4	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.851
A0A178A7Q7	A0A178B758	Uncharacterized protein; Belongs to the heat shock protein 70 family.	HSP90-domain-containing protein.	0.860
A0A178A7Q7	A0A178BDY2	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Heat shock protein Hsp88.	0.947
A0A178ADV4	A0A178A7Q7	DnaJ-domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.793
A0A178ADV4	A0A178AJP9	DnaJ-domain-containing protein.	78 kDa glucose-regulated protein-like protein; Belongs to the heat shock protein 70 family.	0.793
A0A178ADV4	A0A178AL75	DnaJ-domain-containing protein.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.881
A0A178ADV4	A0A178ALS3	DnaJ-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the ClpA/ClpB family.	0.760
A0A178ADV4	A0A178ASL4	DnaJ-domain-containing protein.	Flavin_Reduct domain-containing protein.	0.723
A0A178ADV4	A0A178AZB4	DnaJ-domain-containing protein.	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	0.970
A0A178ADV4	A0A178AZE1	DnaJ-domain-containing protein.	Chaperonin GroL; Belongs to the chaperonin (HSP60) family.	0.749
A0A178ADV4	A0A178B3D4	DnaJ-domain-containing protein.	Uncharacterized protein.	0.723
A0A178ADV4	A0A178B758	DnaJ-domain-containing protein.	HSP90-domain-containing protein.	0.723
A0A178ADV4	A0A178BDY2	DnaJ-domain-containing protein.	Heat shock protein Hsp88.	0.724
A0A178AJP9	A0A178ADV4	78 kDa glucose-regulated protein-like protein; Belongs to the heat shock protein 70 family.	DnaJ-domain-containing protein.	0.793