STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADV7Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (451 aa)    
Predicted Functional Partners:
A0A178B0I0
60S ribosomal protein-like protein L23a.
  
 0.912
A0A178BB31
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.909
A0A178ALZ6
Ribosomal protein L24.
  
 
 0.898
A0A178ANE0
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.855
A0A178ANT0
Uncharacterized protein.
  
 0.849
A0A178AEX1
60S ribosomal protein L5-B.
  
   0.848
A0A178BDA3
40s ribosomal protein-like protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.837
A0A178B579
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.833
A0A178BD91
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.831
A0A178B7C4
40S ribosomal protein-like protein S22; Belongs to the universal ribosomal protein uS8 family.
  
   0.814
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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