Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ADW6Uncharacterized protein. (332 aa)    
Predicted Functional Partners:
A0A178AT57
Uncharacterized protein.
    
 0.998
A0A178AY83
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.998
A0A178B4Z0
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.997
A0A178AK15
Trafficking protein particle complex subunit BET3.
    
 0.992
A0A178B2Y7
Uncharacterized protein.
   
 0.992
A0A178B138
Transport protein particle component.
   
 0.991
A0A178AVE3
Uncharacterized protein.
     
 0.990
A0A178ADN2
Sedlin.
    
 0.989
IQ06DRAFT_9263
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
     
 0.988
A0A178A8Z2
Sedlin.
   
 0.986
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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