A0A178ADZ6 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178ADZ6

Four F5 protein. (63 aa)

Predicted Functional Partners:

A0A178AJ44

0.604

A0A178B3I9

0.604

A0A178AWS0

0.559

A0A178AXI9

0.547

A0A178AV65

0.545

A0A178AG80

0.524

A0A178AWS4

0.524

A0A178BA77

0.524

A0A178BAE3

0.524

A0A178ABK5

0.523

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178ABK5	A0A178ADZ6	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Four F5 protein.	0.523
A0A178ABK5	A0A178AG80	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.999
A0A178ABK5	A0A178AV65	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Ribosomal protein S18.	0.813
A0A178ABK5	A0A178AWS0	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	DUF1682-domain-containing protein.	0.810
A0A178ABK5	A0A178AWS4	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit gamma.	0.999
A0A178ABK5	A0A178AXI9	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.904
A0A178ABK5	A0A178BA77	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.999
A0A178ABK5	A0A178BAE3	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit delta.	0.999
A0A178ADZ6	A0A178ABK5	Four F5 protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.523
A0A178ADZ6	A0A178AG80	Four F5 protein.	Uncharacterized protein.	0.524
A0A178ADZ6	A0A178AJ44	Four F5 protein.	MFS transporter-like protein.	0.604
A0A178ADZ6	A0A178AV65	Four F5 protein.	Ribosomal protein S18.	0.545
A0A178ADZ6	A0A178AWS0	Four F5 protein.	DUF1682-domain-containing protein.	0.559
A0A178ADZ6	A0A178AWS4	Four F5 protein.	T-complex protein 1 subunit gamma.	0.524
A0A178ADZ6	A0A178AXI9	Four F5 protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.547
A0A178ADZ6	A0A178B3I9	Four F5 protein.	MFS general substrate transporter.	0.604
A0A178ADZ6	A0A178BA77	Four F5 protein.	Uncharacterized protein.	0.524
A0A178ADZ6	A0A178BAE3	Four F5 protein.	T-complex protein 1 subunit delta.	0.524
A0A178AG80	A0A178ABK5	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
A0A178AG80	A0A178ADZ6	Uncharacterized protein.	Four F5 protein.	0.524