Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AE29AD domain-containing protein. (241 aa)    
Predicted Functional Partners:
A0A178ADQ4
LsmAD domain-containing protein.
    
 0.993
A0A178AEW5
ATP-dependent RNA helicase-like protein dhh1; Belongs to the DEAD box helicase family.
   
 0.938
A0A178AXG7
ARM repeat-containing protein.
    
   0.938
A0A178AIQ6
mRNA capping enzyme, alpha subunit.
    
   0.879
A0A178ALA4
RNA-binding domain-containing protein.
    
   0.875
A0A178AKZ9
Bifunctional acetylglutamate kinase/N-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family.
    
   0.870
A0A178AFE0
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.861
A0A178A8T6
Nuclear cap-binding protein subunit 2.
    
   0.821
A0A178AX38
ARM repeat-containing protein.
    
   0.815
A0A178B5U6
Sm domain-containing protein.
   
 
 0.738
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
Server load: low (28%) [HD]