Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AE91HCP-like protein. (886 aa)    
Predicted Functional Partners:
A0A178BF85
Uncharacterized protein.
   
 0.906
A0A178ADV8
UBC-like protein.
    
 0.827
A0A178B6G2
UBX domain-containing protein.
   
 0.823
A0A178AZ95
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.788
A0A178AZM5
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.788
A0A178BAY1
NPL4-domain-containing protein.
    
 0.755
A0A178AZL5
Ubiquitin fusion degradation protein.
   
 0.727
A0A178A7Q7
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.720
A0A178AJP9
78 kDa glucose-regulated protein-like protein; Belongs to the heat shock protein 70 family.
   
 0.720
A0A178ABR2
FKS1_dom1 domain-containing protein.
    
 0.716
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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