Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A178AEB3Cysteine proteinase. (784 aa)    
Predicted Functional Partners:
A0A178AWE5
Ubiquitinyl hydrolase 1.
      
 0.646
A0A178AWH3
Cysteine proteinase.
      
 0.643
A0A178ALZ7
Uncharacterized protein.
    
 0.612
A0A178BAP0
Cysteine proteinase.
      
 0.585
A0A178ABP4
MPN domain-containing protein.
      
 0.578
A0A178ARI0
Histone H2A; Belongs to the histone H2A family.
    
  0.558
A0A178B1R8
DUF1903-domain-containing protein.
    
  0.558
A0A178AGQ9
Cysteine proteinase.
   
 0.549
A0A178AH53
Cysteine proteinase.
   
 0.549
A0A178AG67
Polyubiquitin.
    
  0.534
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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