Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AEL0Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)    
Predicted Functional Partners:
A0A178BD65
Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.993
A0A178BD91
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.993
A0A178AEX1
60S ribosomal protein L5-B.
   
 0.992
A0A178AUY6
L30e-like protein.
   
 0.992
A0A178BDJ0
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.992
A0A178A8B4
Ribosomal protein L13.
   
 0.991
A0A178B842
Uncharacterized protein.
   
 0.991
A0A178BBM8
Ribosomal protein L5; Belongs to the universal ribosomal protein uL5 family.
   
 0.991
A0A178ATT4
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.990
A0A178AWX7
Ribosomal protein L10e.
   
 0.990
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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