Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AEM5Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
A0A178ABF2
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.953
A0A178AN07
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.912
A0A178B057
ARM repeat-containing protein.
   
 
 0.771
A0A178AL64
Uncharacterized protein.
   
 
 0.766
A0A178A7U5
NUC153 domain-containing protein.
   
   0.711
A0A178AMV9
Uncharacterized protein.
   
 
 0.610
A0A178AA94
ARM repeat-containing protein.
    
 
 0.582
A0A178AMP5
MAP kinase kinase kinase.
    
   0.500
A0A178AWY8
Kinase-like protein.
    
   0.500
A0A178B8H2
Protein kinase domain-containing protein.
    
   0.500
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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