A0A178AEP4 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178AEP4

Kinase-like protein. (938 aa)

Predicted Functional Partners:

A0A178ATE2

0.925

A0A178B6I8

0.925

A0A178AF89

0.924

A0A178B3X6

0.907

A0A178ABI7

0.872

A0A178B3T1

0.790

A0A178ATX8

0.785

A0A178AX53

0.771

A0A178B274

0.771

A0A178BDK6

0.771

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178ABI7	A0A178AEP4	RFX-type winged-helix domain-containing protein.	Kinase-like protein.	0.872
A0A178ABI7	A0A178ATE2	RFX-type winged-helix domain-containing protein.	Protein kinase rad3; Belongs to the PI3/PI4-kinase family.	0.953
A0A178AEP4	A0A178ABI7	Kinase-like protein.	RFX-type winged-helix domain-containing protein.	0.872
A0A178AEP4	A0A178AF89	Kinase-like protein.	MRC1 domain-containing protein.	0.924
A0A178AEP4	A0A178ATE2	Kinase-like protein.	Protein kinase rad3; Belongs to the PI3/PI4-kinase family.	0.925
A0A178AEP4	A0A178ATX8	Kinase-like protein.	DNA helicase; Belongs to the MCM family.	0.785
A0A178AEP4	A0A178AX53	Kinase-like protein.	Rhodanese-like protein.	0.771
A0A178AEP4	A0A178B274	Kinase-like protein.	Rhodanese domain-containing protein.	0.771
A0A178AEP4	A0A178B3T1	Kinase-like protein.	DNA helicase; Belongs to the MCM family.	0.790
A0A178AEP4	A0A178B3X6	Kinase-like protein.	BRCT domain-containing protein.	0.907
A0A178AEP4	A0A178B6I8	Kinase-like protein.	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily.	0.925
A0A178AEP4	A0A178BDK6	Kinase-like protein.	Rhodanese-like protein.	0.771
A0A178AF89	A0A178AEP4	MRC1 domain-containing protein.	Kinase-like protein.	0.924
A0A178AF89	A0A178ATE2	MRC1 domain-containing protein.	Protein kinase rad3; Belongs to the PI3/PI4-kinase family.	0.996
A0A178AF89	A0A178ATX8	MRC1 domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.980
A0A178AF89	A0A178B3T1	MRC1 domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.953
A0A178AF89	A0A178B3X6	MRC1 domain-containing protein.	BRCT domain-containing protein.	0.982
A0A178AF89	A0A178B6I8	MRC1 domain-containing protein.	Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily.	0.900
A0A178ATE2	A0A178ABI7	Protein kinase rad3; Belongs to the PI3/PI4-kinase family.	RFX-type winged-helix domain-containing protein.	0.953
A0A178ATE2	A0A178AEP4	Protein kinase rad3; Belongs to the PI3/PI4-kinase family.	Kinase-like protein.	0.925