Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A178AES9Helicase C-terminal domain-containing protein. (199 aa)    
Predicted Functional Partners:
A0A178BD44
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.848
A0A178ABT4
PIN domain-like protein.
  
 0.845
A0A178AA85
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 0.842
A0A178AVB8
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
   
 0.839
A0A178AFF4
DUF1767 domain-containing protein.
    
 0.837
A0A178AN57
DNA repair protein.
    
 0.837
A0A178AQ92
Replication protein A, subunit RPA32.
    
 0.806
A0A178A9T0
UvrD-helicase-domain-containing protein.
  
 0.801
A0A178B1F4
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.793
A0A178ATE2
Protein kinase rad3; Belongs to the PI3/PI4-kinase family.
   
 0.791
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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