Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AEU7Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
A0A178ABZ5
Uncharacterized protein.
    
 0.999
A0A178AJP8
DASH complex, subunit Dad4.
    
 0.999
A0A178AQ26
Uncharacterized protein.
    
 0.999
A0A178B0C2
Uncharacterized protein.
    
 0.999
A0A178B841
DASH complex, subunit Spc19.
   
 0.999
A0A178B4Z7
Uncharacterized protein.
    
 0.998
A0A178B174
Uncharacterized protein.
    
 0.997
A0A178AYL5
Spindle pole body component.
    
 0.996
A0A178AV46
Uncharacterized protein.
    
 0.992
A0A178B253
DHR10 domain-containing protein.
     
 0.992
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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