Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A178AEV5RING-type domain-containing protein. (193 aa)    
Predicted Functional Partners:
A0A178BDP7
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.802
A0A178B9Q6
Phosphodiesterase.
    
 0.775
A0A178AKM6
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.734
A0A178AS57
Uncharacterized protein.
    
  0.724
A0A178A9N8
SPT16-domain-containing protein.
    
 
 0.723
A0A178BAK7
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]
    
 
 0.722
A0A178AT17
Histone H2B; Belongs to the histone H2B family.
    
  0.718
A0A178B8B3
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.696
A0A178ALL3
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.690
A0A178A6Z7
Histone-fold-containing protein.
    
 0.673
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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