Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AFA7Copper-fist domain-containing protein. (494 aa)    
Predicted Functional Partners:
A0A178ATW1
Response regulator.
   
 0.689
A0A178BFE8
Ctr-domain-containing protein.
      
 0.674
A0A178AEX2
Putative iron/copper transporter Atx1.
      
 0.646
A0A178AAZ9
ARM repeat-containing protein.
    
 0.643
A0A178B637
Kinase-like protein; Belongs to the protein kinase superfamily.
   
 
 0.630
A0A178AJS2
Uncharacterized protein.
    
  0.622
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.605
A0A178B9S5
Pali-domain-containing protein.
    
 0.595
A0A178B6K9
WD40 repeat-like protein.
   
 0.587
A0A178BDE0
Transcription elongation factor.
    
  0.566
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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