Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AFI2Uncharacterized protein. (610 aa)    
Predicted Functional Partners:
A0A178AKJ0
Malate synthase; Belongs to the malate synthase family.
   
 
 0.977
A0A178AMD3
ATP citrate lyase-like protein subunit.
     
 0.969
A0A178A8H4
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.965
A0A178BC39
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.962
A0A178BAW6
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.957
A0A178AK96
Acetyl-coenzyme A synthetase.
   
 
 0.956
A0A178AM47
ATP-citrate synthase (ATP-citrate (Pro-S-)-lyase).
     
 0.955
A0A178B097
Malate dehydrogenase.
   
 0.951
A0A178B2L8
Malate dehydrogenase.
   
 0.951
A0A178ADM3
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.939
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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