Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AFP4Btz domain-containing protein. (700 aa)    
Predicted Functional Partners:
A0A178AWY7
Mago-bind domain-containing protein.
     
  0.963
A0A178AZH0
ARM repeat-containing protein.
    
  0.961
A0A178AD22
Mago nashi protein.
    
  0.951
A0A178B3M5
RNA-binding domain-containing protein.
    
  0.631
A0A178AQS4
Uncharacterized protein.
 
  
  0.508
A0A178ACU6
Uncharacterized protein.
  
 
  0.498
A0A178AMH5
SNF5-domain-containing protein.
    
 0.495
A0A178ANJ2
Uncharacterized protein.
  
 
  0.487
A0A178B808
Calponin-homology (CH) domain-containing protein.
  
  0.486
A0A178AJ31
Uncharacterized protein.
    
  0.483
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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