Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AFP5Jumonji domain-containing 5. (470 aa)    
Predicted Functional Partners:
A0A178AMN6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.969
A0A178AHF8
DUF572-domain-containing protein.
    
   0.859
A0A178AD06
Kinase-like protein.
    
  0.599
A0A178AIY2
ZZ-type domain-containing protein.
    
  0.599
A0A178AN45
Uncharacterized protein.
    
  0.599
A0A178AQN8
Mitochondrial protein-like protein Fmp25.
    
  0.599
A0A178ARN6
RCC1/BLIP-II protein.
    
  0.599
A0A178AVM0
RCC1/BLIP-II protein.
    
  0.599
A0A178B775
RCC1/BLIP-II protein.
    
  0.599
A0A178AEP8
Uncharacterized protein.
    
  0.482
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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