Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AFW5NAD(P)-binding protein. (243 aa)    
Predicted Functional Partners:
A0A178AV27
Pentulose kinase.
   
 0.884
A0A178ATE0
NAD(P)-binding protein.
     
  0.858
A0A178A7N4
GroES-like protein.
   
 
 0.769
A0A178B5C9
L-threonine 3-dehydrogenase.
   
 
 0.769
A0A178AXA9
Uncharacterized protein.
   
 0.714
A0A178AJ47
PKS_ER domain-containing protein.
   
 
 0.648
A0A178B026
GroES-like protein.
   
 
 0.648
A0A178ARG9
NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.514
A0A178AXE9
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.489
A0A178AA44
Uncharacterized protein.
   
  0.480
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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